Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009683.1 Corchorus capsularis cultivar CVL-1 contig09704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8128

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
334--390
24
2.4
24
90
0
87
36
29
10
22
1.88
2377--2421
16
2.6
17
82
6
56
48
17
8
24
1.75
6865--7010
16
9.2
16
79
6
154
32
39
19
8
1.82
7123--7161
2
19.0
2
94
5
69
48
2
0
48
1.15
7300--7342
11
3.9
11
90
0
68
46
6
4
41
1.51
7298--7342
22
2.0
22
95
0
81
46
6
4
42
1.50
7614--7694
24
3.4
24
70
13
85
33
2
12
51
1.52
7603--7700
48
2.0
48
100
0
196
36
4
10
48
1.56

Tables:   1

The End!