Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009693.1 Corchorus capsularis cultivar CVL-1 contig09714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17505

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3919--4086
86
2.0
86
95
0
300
27
36
10
25
1.88
7142--7184
22
2.0
22
81
9
52
55
13
6
23
1.62
6759--7203
232
1.9
232
88
1
669
34
20
13
31
1.92
12469--12520
14
3.7
14
76
16
54
55
1
3
38
1.29
12469--12518
17
3.1
17
72
16
52
56
2
4
38
1.30
13533--13566
8
4.2
8
100
0
68
50
11
0
38
1.39
13925--13982
28
2.1
28
80
6
64
34
10
3
51
1.53
15825--15902
22
3.5
22
72
19
63
43
12
7
35
1.72
16039--16099
22
2.8
22
85
2
79
39
9
13
37
1.77
16131--16296
44
3.9
43
78
8
153
35
17
11
35
1.86
16213--16380
22
8.1
20
73
11
95
33
16
9
39
1.81
16385--16426
22
1.9
22
90
0
66
52
19
4
23
1.65

Tables:   1

The End!