Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009694.1 Corchorus capsularis cultivar CVL-1 contig09715, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21827

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1150--1225
33
2.3
33
97
0
143
19
17
22
40
1.91
1325--1375
17
3.1
16
78
10
57
21
21
17
39
1.93
1820--1924
16
6.6
16
65
10
63
17
6
35
40
1.75
1826--1908
32
2.6
32
88
0
121
18
6
32
43
1.74
1822--1924
32
3.2
31
80
5
116
17
6
33
41
1.76
9572--9652
42
1.9
42
87
5
119
40
25
11
22
1.87
16781--16812
4
8.0
4
100
0
64
75
0
0
25
0.81
16950--18015
438
2.4
433
79
7
1111
43
12
13
31
1.80
20851--21086
88
2.4
96
74
20
222
35
12
6
46
1.67
20894--21084
98
2.1
88
82
11
222
37
13
5
43
1.67

Tables:   1

The End!