Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009695.1 Corchorus capsularis cultivar CVL-1 contig09716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23481

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--59
2
27.0
2
100
0
108
0
50
0
50
1.00
5136--5234
50
2.0
50
89
0
153
24
22
23
30
1.99
5854--5994
70
2.0
70
100
0
282
42
18
17
21
1.89
12803--12875
29
2.5
29
84
4
85
61
9
6
21
1.50
14216--14264
16
3.1
16
88
2
73
40
34
14
10
1.79
14972--15030
31
1.9
31
85
0
82
28
15
6
49
1.70
19763--19998
78
3.2
76
84
10
292
51
0
12
35
1.45
19845--19998
70
2.2
69
85
5
195
51
1
11
35
1.47
20339--20399
28
2.1
30
87
6
90
36
8
0
55
1.30

Tables:   1

The End!