Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009696.1 Corchorus capsularis cultivar CVL-1 contig09717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35981

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--45
2
23.0
2
95
4
83
48
0
0
51
1.00
1008--1077
31
2.3
31
100
0
140
32
30
17
20
1.95
5212--5243
12
2.4
14
90
10
50
46
3
9
40
1.52
8376--8459
41
2.0
41
100
0
168
34
8
23
33
1.85
17003--17052
16
3.1
17
80
11
61
16
10
36
38
1.82
17200--17283
32
2.6
32
84
3
107
9
10
25
54
1.64
17231--17290
16
3.8
16
80
2
68
10
10
25
55
1.64
21676--21720
15
2.9
15
83
6
54
33
0
13
53
1.40
22087--22166
28
2.8
28
79
11
90
26
21
13
38
1.90
22861--22940
28
2.8
28
85
12
108
38
13
22
25
1.91
26898--26933
19
1.9
18
88
5
54
33
22
2
41
1.68
29800--29837
18
2.1
19
90
5
60
23
10
18
47
1.79
30336--30569
91
2.6
91
93
0
396
34
13
20
31
1.91
30708--30804
52
1.9
51
87
4
142
39
26
9
24
1.86
34930--35082
75
2.0
76
97
1
290
35
13
16
33
1.89

Tables:   1

The End!