Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009697.1 Corchorus capsularis cultivar CVL-1 contig09718, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4294

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2807--2896
21
4.3
20
77
8
81
20
20
7
52
1.70
2857--2903
21
2.2
21
85
7
60
19
17
10
53
1.72
2891--3173
22
13.0
22
70
19
107
17
21
7
54
1.67
3001--3290
21
13.6
21
71
17
161
18
20
5
55
1.61
3001--3245
43
5.7
42
74
12
185
17
20
5
56
1.60
3480--3574
32
2.9
32
76
16
95
23
23
7
46
1.77
3580--3724
29
5.2
28
63
21
72
25
18
7
48
1.74
3567--3727
55
2.9
55
83
0
223
26
18
7
48
1.74
3749--3807
22
2.7
22
86
5
75
22
23
5
49
1.70

Tables:   1

The End!