Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009698.1 Corchorus capsularis cultivar CVL-1 contig09719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46588

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1033--1101
34
2.0
34
82
0
84
40
24
10
24
1.86
7625--7735
57
1.9
57
98
0
213
29
17
11
41
1.85
23578--23634
29
1.9
29
85
3
78
36
7
33
22
1.81
24180--24215
18
2.0
18
94
0
63
36
22
25
16
1.94
26234--26267
16
2.1
16
94
0
59
29
8
14
47
1.75
27415--27456
21
2.0
20
86
13
59
64
11
0
23
1.27
36777--36873
49
2.0
49
97
0
185
17
20
50
11
1.76

Tables:   1

The End!