Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009703.1 Corchorus capsularis cultivar CVL-1 contig09724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17652

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1212--1263
24
2.2
23
93
3
86
69
1
11
17
1.27
7309--7429
64
1.9
64
96
3
226
28
24
13
33
1.93
12022--12079
25
2.3
25
90
0
98
32
29
22
15
1.95
12038--12092
25
2.2
25
83
0
65
32
25
20
21
1.97
14091--14199
56
1.9
56
92
0
182
42
11
15
31
1.82
15268--15437
79
2.1
80
92
1
279
29
12
15
42
1.83
15453--15483
13
2.4
13
100
0
62
45
0
0
54
0.99
15487--15549
29
2.1
30
85
8
83
28
3
20
47
1.65

Tables:   1

The End!