Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009704.1 Corchorus capsularis cultivar CVL-1 contig09725, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13242

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
972--2141
587
2.0
585
96
1
2157
27
16
11
44
1.82
2695--2740
23
2.0
23
100
0
92
43
13
8
34
1.74
2852--2884
13
2.5
13
95
0
57
39
12
15
33
1.84
7947--7972
13
2.0
13
100
0
52
46
15
7
30
1.74
9838--9884
21
2.2
22
81
11
53
34
25
2
38
1.68
10196--10222
11
2.5
11
100
0
54
48
0
7
44
1.31

Tables:   1

The End!