Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009705.1 Corchorus capsularis cultivar CVL-1 contig09726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47874

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
653--709
22
2.6
22
97
0
105
35
0
10
54
1.35
3470--3555
45
1.9
45
90
2
138
54
8
13
23
1.66
23946--23977
12
2.7
12
95
0
55
46
18
34
0
1.49
29754--32027
757
3.0
756
95
0
4035
27
16
18
37
1.92
34785--34885
29
3.4
29
70
15
98
29
21
24
23
1.99
34693--34918
31
7.5
30
67
11
140
31
20
22
25
1.98
34694--34916
60
3.7
60
90
2
351
31
20
22
25
1.98
34945--35143
31
6.6
30
71
13
140
26
20
19
34
1.96
34976--35139
60
2.7
59
85
3
231
26
20
18
34
1.96
35900--35946
21
2.2
21
96
0
85
31
25
10
31
1.90

Tables:   1

The End!