Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009707.1 Corchorus capsularis cultivar CVL-1 contig09728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33110

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--216
15
2.2
15
100
0
66
6
33
6
54
1.50
471--543
34
2.1
34
100
0
146
38
21
12
27
1.89
1742--1769
1
28.0
1
100
0
56
100
0
0
0
0.00
2628--2758
64
2.0
64
91
0
208
41
16
12
29
1.85
15421--15445
6
4.2
6
100
0
50
16
16
0
68
1.22
17470--17541
31
2.4
29
82
13
83
29
25
18
27
1.98
19288--19312
6
4.2
6
100
0
50
36
16
0
48
1.46
23312--23403
33
2.8
33
86
0
139
25
23
18
32
1.97
29828--29852
6
4.2
6
100
0
50
16
16
0
68
1.22
31761--31805
22
2.0
22
91
8
74
35
13
33
17
1.89

Tables:   1

The End!