Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009712.1 Corchorus capsularis cultivar CVL-1 contig09733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68463

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--183
31
6.0
31
71
14
132
26
19
19
35
1.95
48--148
29
3.4
28
72
12
96
26
20
19
32
1.97
18--179
60
2.7
60
92
3
265
25
19
19
35
1.96
2610--2750
54
2.6
54
94
0
255
28
12
13
46
1.79
4876--4900
1
25.0
1
100
0
50
100
0
0
0
0.00
16284--16402
31
3.9
31
78
3
134
33
25
22
18
1.97
21786--21884
31
3.2
31
85
0
126
17
20
28
34
1.95
30804--30950
72
2.1
71
86
1
204
48
18
8
24
1.76
47985--48028
12
3.6
12
87
6
61
29
13
29
27
1.94
47993--48029
13
2.9
13
92
4
58
32
13
29
24
1.93
50062--50119
20
3.1
19
73
22
59
36
17
22
24
1.95
50169--50207
12
3.6
12
74
25
50
30
15
28
25
1.96
53918--54465
184
3.0
183
82
1
621
31
17
16
33
1.93
59606--59654
22
2.3
21
82
6
55
34
4
2
59
1.28
63286--63315
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!