Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009713.1 Corchorus capsularis cultivar CVL-1 contig09734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32345

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--1409
183
1.9
182
81
4
425
32
16
17
33
1.93
2525--2591
31
2.2
31
89
5
102
49
11
17
20
1.79
2721--2796
31
2.5
31
93
0
134
36
17
9
36
1.81
2721--2861
31
4.6
31
82
3
133
31
16
12
39
1.85
3764--3789
3
8.7
3
100
0
52
34
0
0
65
0.93
3839--3975
31
4.5
31
78
5
127
38
9
17
34
1.82
4094--4160
31
2.2
31
81
5
84
22
16
10
50
1.75
5369--5405
18
2.1
18
100
0
74
40
27
5
27
1.78
22240--22478
78
3.1
78
96
0
442
28
12
20
38
1.90
30734--30761
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!