Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009722.1 Corchorus capsularis cultivar CVL-1 contig09743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21038

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12914--13004
25
3.6
25
87
0
119
24
23
25
27
2.00
13726--13775
21
2.3
22
86
10
68
42
2
2
54
1.23
17090--17157
35
1.9
35
100
0
136
25
16
8
50
1.73
17549--17582
6
5.5
6
96
3
59
50
0
0
50
1.00
19571--19686
60
1.9
60
96
0
214
31
14
17
36
1.90

Tables:   1

The End!