Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009729.1 Corchorus capsularis cultivar CVL-1 contig09750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29869

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--36
2
17.5
2
100
0
70
48
0
0
51
1.00
5113--5138
10
2.6
10
100
0
52
0
11
0
88
0.52
9718--9763
22
2.1
22
84
8
58
30
10
4
54
1.55
9792--9877
45
1.9
45
83
4
111
38
17
11
32
1.86
9792--10180
22
17.7
22
67
16
112
36
15
10
37
1.82
9927--10198
44
6.2
44
69
16
133
35
15
9
39
1.80
10170--10219
20
2.5
20
90
0
73
30
16
8
46
1.75
10394--10452
29
1.9
30
86
10
84
45
3
15
35
1.63
10395--10462
31
2.2
30
82
10
75
48
4
13
33
1.62
10946--11028
42
2.0
43
85
7
116
24
18
21
36
1.95
11016--11058
20
2.1
21
86
4
61
39
20
18
20
1.93
22698--22778
40
2.0
40
100
0
162
34
30
24
9
1.88
29481--29511
2
16.0
2
93
6
55
51
0
0
48
1.00
29843--29869
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!