Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009736.1 Corchorus capsularis cultivar CVL-1 contig09757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24364

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3382--3441
25
2.7
21
75
20
68
55
3
3
38
1.33
8071--8100
16
1.9
16
93
6
53
50
26
0
23
1.50
8373--8403
2
15.5
2
100
0
62
51
0
0
48
1.00
9074--9108
18
1.9
18
88
0
52
22
8
8
60
1.54
10158--10228
36
2.0
36
97
0
133
32
29
15
22
1.95
15682--15712
14
2.2
14
94
0
53
29
6
16
48
1.70
18441--18509
31
2.2
31
89
0
102
47
4
17
30
1.67
19122--19157
15
2.3
16
90
4
56
58
22
5
13
1.56
19835--19877
23
1.9
23
90
4
70
16
18
27
37
1.92
24254--24285
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!