Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009742.1 Corchorus capsularis cultivar CVL-1 contig09763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45914

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1696--1756
32
1.9
32
86
0
86
55
21
14
8
1.65
1744--1768
13
1.9
13
100
0
50
48
32
12
8
1.69
2638--2665
2
14.0
2
100
0
56
0
0
50
50
1.00
7950--8013
31
2.1
31
82
5
76
46
3
6
43
1.44
8351--8381
2
15.5
2
100
0
62
48
0
0
51
1.00
9946--9970
13
1.9
13
100
0
50
52
0
0
48
1.00
13769--13843
30
2.6
29
85
6
107
17
26
14
41
1.88
13769--13850
28
2.8
29
87
7
103
18
26
14
40
1.89
13916--13990
29
2.5
30
82
6
100
42
14
24
18
1.88
27019--27169
80
1.9
77
91
4
248
37
11
12
37
1.80
32572--32597
13
2.0
13
100
0
52
30
30
15
23
1.95
38178--38235
26
2.4
23
77
22
66
67
6
10
15
1.41
43372--43478
33
3.2
32
81
5
117
10
28
37
23
1.88

Tables:   1

The End!