Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009746.1 Corchorus capsularis cultivar CVL-1 contig09767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27471

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1201--1233
15
2.2
15
94
0
57
45
9
6
39
1.61
2395--2434
21
1.9
21
89
0
62
30
17
32
20
1.95
13433--13707
109
2.5
109
92
4
437
48
2
11
38
1.51
19148--19172
1
25.0
1
100
0
50
100
0
0
0
0.00
25625--25668
21
2.1
21
83
8
54
20
34
6
38
1.79
25855--25936
33
2.5
33
82
4
103
17
35
31
15
1.91
25876--25961
33
2.6
33
83
0
109
16
36
33
13
1.88
26106--26147
14
2.7
15
82
14
50
54
4
26
14
1.59
26253--26310
29
2.2
25
82
14
64
20
6
6
65
1.40
26572--26836
107
2.5
108
89
1
399
38
7
12
42
1.70

Tables:   1

The End!