Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009749.1 Corchorus capsularis cultivar CVL-1 contig09770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18184

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6237--6266
15
2.0
15
93
0
51
20
10
26
43
1.83
8280--8536
128
2.0
128
98
0
496
38
9
10
41
1.73
8950--8974
2
12.5
2
100
0
50
52
0
0
48
1.00
11791--11852
32
1.9
32
93
0
106
37
12
14
35
1.85
14017--14247
85
2.7
84
91
0
363
39
5
14
39
1.70
15948--15988
21
2.0
21
90
0
64
43
17
26
12
1.84
18143--18184
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!