Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009751.1 Corchorus capsularis cultivar CVL-1 contig09772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10979

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6105--6594
35
14.0
35
95
0
829
29
14
22
33
1.93
6542--6798
35
7.3
35
86
1
311
28
18
17
35
1.94
6191--6798
70
8.7
71
89
4
338
28
16
20
34
1.94
6105--6664
105
5.3
106
90
3
812
28
14
22
34
1.93
7436--7584
74
2.0
74
100
0
298
16
21
6
55
1.64
7447--7564
37
3.2
37
62
21
93
14
20
7
57
1.61
7969--8286
87
3.7
87
98
0
595
44
5
16
33
1.72
7969--8286
173
1.8
173
96
1
593
44
5
16
33
1.72
9104--9165
29
2.1
29
87
0
88
33
24
9
32
1.88
10250--10291
6
7.0
6
91
0
66
83
14
0
2
0.75

Tables:   1

The End!