Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009753.1 Corchorus capsularis cultivar CVL-1 contig09774, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17123

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10198--10723
272
1.9
274
97
1
1002
28
16
22
32
1.96
11632--11665
15
2.2
16
90
10
54
14
14
11
58
1.63
12811--12857
16
3.0
16
84
6
69
42
29
14
12
1.83
12812--12857
15
2.9
15
83
6
56
43
30
15
10
1.81
12943--12981
15
2.6
16
84
12
55
35
28
10
25
1.89
12943--12986
15
2.9
15
82
0
52
36
27
9
27
1.87
15129--15165
16
2.3
16
90
0
56
43
40
10
5
1.63
16492--16548
15
3.6
15
75
17
53
40
36
15
7
1.75

Tables:   1

The End!