Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009754.1 Corchorus capsularis cultivar CVL-1 contig09775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17228

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3571--3600
2
15.0
2
92
0
51
46
0
0
53
1.00
8060--8101
21
2.0
21
85
0
57
33
11
28
26
1.92
8081--8164
34
2.5
34
80
7
116
32
10
22
34
1.89
10314--10637
159
2.0
159
97
0
612
39
15
12
32
1.85
13329--13369
7
6.1
7
86
11
59
46
12
0
41
1.41
14687--15080
22
17.8
21
69
14
159
37
9
15
37
1.81
14977--15022
24
2.0
24
91
4
76
56
6
10
26
1.58
15050--15201
62
2.5
62
90
0
232
45
9
11
34
1.72
15103--15201
22
4.7
21
73
16
80
46
9
8
36
1.65
15298--15363
31
2.1
31
88
5
98
28
21
4
45
1.71
15463--15539
38
2.1
35
88
7
109
14
16
11
57
1.66
16116--16181
31
2.1
31
88
5
98
28
21
4
45
1.71
16280--16356
38
2.1
35
88
7
109
14
15
11
58
1.63
16488--16530
19
2.1
21
84
16
56
27
6
2
62
1.33
16700--16785
22
3.9
22
77
6
84
36
10
16
37
1.83
16701--16787
44
2.0
43
82
6
104
36
10
17
35
1.84
16774--16836
26
2.5
24
76
5
72
33
7
20
38
1.82

Tables:   1

The End!