Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009760.1 Corchorus capsularis cultivar CVL-1 contig09781, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8425

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1408--1530
22
5.6
22
78
7
97
40
13
9
36
1.77
1457--1637
22
8.5
22
72
10
124
39
19
8
32
1.82
1677--1733
22
2.6
22
91
0
87
38
8
17
35
1.81
1699--1818
45
2.7
44
79
6
116
35
14
13
36
1.85
3790--3815
12
2.2
12
100
0
52
15
15
26
42
1.87
5841--5922
41
2.0
41
92
0
137
39
21
6
32
1.78
5933--6696
381
2.0
381
100
0
1528
38
14
13
33
1.85

Tables:   1

The End!