Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009761.1 Corchorus capsularis cultivar CVL-1 contig09782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60516

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3341--3384
22
2.0
22
90
0
70
34
6
20
38
1.79
12665--12693
1
29.0
1
100
0
58
0
0
0
100
0.00
17029--17106
30
2.5
30
91
4
120
32
26
16
24
1.96
18933--18962
2
15.5
2
93
6
53
46
0
0
53
1.00
22130--22154
10
2.5
10
100
0
50
8
0
0
92
0.40
32923--32953
12
2.6
12
89
0
53
22
41
0
35
1.54
36713--36742
15
2.1
15
93
6
53
86
13
0
0
0.57
37943--38037
37
2.6
37
84
3
129
55
11
18
13
1.68
37967--38047
37
2.4
32
80
15
92
58
12
14
14
1.64
38187--38256
32
2.2
32
82
5
79
45
7
15
31
1.73
49797--49826
3
10.0
3
92
0
51
63
0
36
0
0.95
57427--57491
26
2.9
21
75
20
76
30
3
20
46
1.66
57670--58743
532
2.0
522
92
2
1774
32
16
14
36
1.89

Tables:   1

The End!