Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009767.1 Corchorus capsularis cultivar CVL-1 contig09788, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10670

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2234--3318
35
30.9
35
89
3
1193
33
21
17
28
1.95
4396--4442
23
2.1
22
88
4
67
0
17
2
80
0.80
4500--4576
37
2.1
37
90
2
120
40
11
10
37
1.76
8703--9006
87
3.5
86
89
2
468
36
15
5
42
1.71
9540--9568
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!