Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009771.1 Corchorus capsularis cultivar CVL-1 contig09792, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37044

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1677--1822
76
1.9
74
97
2
274
53
6
10
29
1.60
1682--1798
36
3.1
36
62
29
82
53
7
11
27
1.63
1789--1839
21
2.4
21
87
6
68
58
1
3
35
1.28
6369--6625
132
1.9
132
89
3
401
29
19
17
32
1.95
14405--14448
21
2.1
21
100
0
88
34
27
4
34
1.77
16992--17110
61
2.0
61
96
0
220
42
6
17
33
1.76
29042--29083
21
2.0
21
90
0
66
14
30
23
30
1.94
31600--31649
23
2.3
22
86
13
68
20
14
16
50
1.78
33951--34015
30
2.3
26
84
10
76
55
6
4
33
1.45
34144--34480
161
2.1
161
96
3
626
39
10
13
35
1.80
35877--35952
28
2.7
28
100
0
152
39
18
7
34
1.80
37020--37044
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!