Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009772.1 Corchorus capsularis cultivar CVL-1 contig09793, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20968

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4190--4231
22
1.9
22
95
0
75
47
11
0
40
1.40
4786--4820
17
2.0
18
88
5
54
54
0
14
31
1.40
8833--8859
2
13.5
2
100
0
54
48
0
0
51
1.00
17431--17468
17
2.2
18
90
4
60
31
15
31
21
1.94
19983--20015
2
17.0
2
90
6
50
51
0
3
45
1.16

Tables:   1

The End!