Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009774.1 Corchorus capsularis cultivar CVL-1 contig09795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24233

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799--826
2
14.0
2
100
0
56
50
0
0
50
1.00
5160--5202
17
2.5
17
96
0
77
30
13
34
20
1.92
5514--5891
155
2.4
155
82
3
431
33
20
13
32
1.92
9685--9714
2
15.0
2
100
0
60
50
0
0
50
1.00
11554--11820
133
2.0
133
100
0
534
33
17
17
31
1.94
16747--16898
72
2.1
72
82
2
189
42
25
7
24
1.81
17164--17202
20
2.0
20
89
0
60
35
10
15
38
1.81
17233--17304
28
2.6
28
86
0
99
31
16
16
34
1.92
17233--17316
28
3.0
28
83
0
78
30
15
16
36
1.90

Tables:   1

The End!