Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009777.1 Corchorus capsularis cultivar CVL-1 contig09798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31388

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3658--3693
18
1.9
20
88
11
58
0
11
0
88
0.50
3658--3695
10
3.9
10
86
3
51
0
10
0
89
0.49
12748--12950
70
2.9
69
84
2
280
33
16
16
33
1.91
13062--13344
71
4.0
70
83
5
349
32
14
18
34
1.91
13310--13437
64
2.0
64
96
0
238
25
18
17
38
1.93
18768--18843
29
2.6
29
82
14
84
38
21
11
28
1.89
18967--19043
29
2.6
29
82
10
93
29
9
23
37
1.86
19392--19464
38
1.9
38
85
0
101
52
8
9
30
1.63
28803--28855
24
2.2
24
96
0
97
22
11
28
37
1.89
30933--30965
6
5.7
6
92
7
59
36
15
0
48
1.45
31053--31189
70
2.0
70
88
2
204
35
11
1
51
1.48
30997--31384
193
2.0
193
97
0
740
34
13
3
48
1.60
31246--31388
70
2.0
70
87
2
207
37
11
1
50
1.47

Tables:   1

The End!