Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009785.1 Corchorus capsularis cultivar CVL-1 contig09806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17212

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1841--1885
21
2.1
21
95
0
81
46
24
4
24
1.71
2024--2085
21
2.9
21
82
2
70
22
6
22
48
1.73
2277--2333
21
2.7
21
81
8
71
29
10
15
43
1.80
2645--2684
21
1.9
21
94
0
71
30
5
25
40
1.77
4685--4724
21
1.9
21
89
0
62
12
0
15
72
1.12
4685--4726
22
2.0
21
85
4
57
11
0
16
71
1.14
7748--7817
19
3.3
19
68
24
59
44
15
31
8
1.77
7744--7824
27
3.3
27
61
28
72
43
19
29
7
1.78
7731--7829
45
2.2
45
96
1
182
43
16
31
9
1.79

Tables:   1

The End!