Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009786.1 Corchorus capsularis cultivar CVL-1 contig09807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19947

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--92
3
11.3
3
93
6
61
65
0
0
34
0.93
753--908
73
2.1
74
90
2
242
41
9
26
22
1.84
1892--1924
2
16.5
2
100
0
66
51
0
0
48
1.00
1964--1992
2
14.5
2
100
0
58
51
0
0
48
1.00
1990--2017
3
9.3
3
100
0
56
67
0
0
32
0.91
2677--2832
73
2.1
74
89
2
233
42
9
26
21
1.84
5718--5773
27
2.1
27
100
0
112
17
16
14
51
1.76
5721--5781
27
2.3
27
91
5
97
22
16
13
47
1.81
16199--16314
57
2.0
57
89
0
178
31
27
13
26
1.94
19549--19613
33
2.0
33
84
6
87
13
38
32
15
1.87
19692--19776
32
2.6
33
84
1
109
11
36
37
14
1.82
19692--19797
33
3.2
33
81
6
110
13
35
35
15
1.86

Tables:   1

The End!