Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009789.1 Corchorus capsularis cultivar CVL-1 contig09810, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32906

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
4237--4335
31
3.1
31
83
4
108
11
37
37
14
1.81
5278--5316
19
2.1
19
85
4
53
25
5
28
41
1.77
13846--13894
25
2.0
25
91
0
80
36
18
16
28
1.92
19476--19501
13
2.0
13
100
0
52
23
0
15
61
1.33
21484--21515
1
32.0
1
100
0
64
0
0
0
100
0.00
25809--25856
18
2.6
19
77
12
55
4
50
2
43
1.33
27620--27657
18
2.1
18
95
0
67
44
21
10
23
1.83
30490--30570
35
2.3
35
77
10
85
48
4
1
45
1.32
32309--32381
27
2.7
27
82
0
83
16
17
27
38
1.91
32850--32885
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!