Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009790.1 Corchorus capsularis cultivar CVL-1 contig09811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29628

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1767--1816
18
2.7
18
81
9
57
76
0
18
6
0.99
3621--3667
9
5.2
9
79
7
51
76
0
17
6
0.98
3620--3681
25
2.4
26
78
2
63
72
3
16
8
1.21
11227--11270
23
1.9
23
81
9
54
18
29
20
31
1.96
14021--14060
17
2.4
17
95
0
71
22
35
15
27
1.94
17908--17943
19
1.9
18
88
5
54
72
2
13
11
1.23
18913--18957
24
1.9
23
81
4
54
11
20
0
68
1.19
28471--28531
30
2.0
31
87
9
90
32
16
3
47
1.63
28468--28538
30
2.3
31
83
11
85
32
14
4
49
1.62
28965--29178
22
9.8
22
71
14
88
37
10
14
36
1.81
29272--29360
22
4.0
22
77
11
101
33
7
22
35
1.83

Tables:   1

The End!