Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009792.1 Corchorus capsularis cultivar CVL-1 contig09813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19198

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1416--1449
11
3.2
10
84
15
50
29
2
17
50
1.61
6402--6450
21
2.3
21
82
6
55
14
28
16
40
1.87
12220--12249
15
2.0
15
93
0
51
73
3
0
23
0.98
13522--13630
55
2.0
55
90
1
173
39
27
8
24
1.84
13548--13647
55
1.9
53
84
10
134
40
27
7
26
1.81
14250--14279
1
30.0
1
93
0
51
96
0
0
3
0.21

Tables:   1

The End!