Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009794.1 Corchorus capsularis cultivar CVL-1 contig09815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21689

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
449--477
2
15.0
2
92
7
51
51
0
0
48
1.00
5304--5352
21
2.3
21
85
0
62
28
28
32
10
1.90
13164--13246
30
2.8
30
78
12
84
48
15
7
28
1.72
13191--13246
29
1.9
29
85
7
78
50
16
10
23
1.76
18264--18310
22
2.2
22
88
11
71
63
8
14
12
1.50
18453--18493
19
2.1
20
90
4
66
73
0
24
2
0.96
20260--20358
21
4.7
19
70
21
56
21
22
8
48
1.76
20371--20404
16
2.1
16
94
0
59
14
17
8
58
1.61
20448--20529
35
2.4
34
79
6
92
15
19
3
60
1.49
20393--20666
82
3.4
77
74
16
189
18
20
4
56
1.59
20596--20688
22
4.2
22
82
8
118
20
19
3
56
1.55
20594--20686
44
2.1
44
88
2
134
19
19
3
58
1.53
20796--20923
22
6.0
21
82
7
118
20
21
5
52
1.66
20805--20901
20
4.7
20
82
8
97
20
20
5
53
1.64

Tables:   1

The End!