Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009796.1 Corchorus capsularis cultivar CVL-1 contig09817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9515

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--52
17
2.9
18
80
11
61
0
19
0
80
0.71
2--48
7
6.6
7
76
13
51
0
19
0
80
0.70
690--734
15
3.2
13
79
14
54
37
15
4
42
1.67
1859--1959
42
2.4
42
78
3
114
42
13
21
21
1.88
2875--2928
14
4.0
13
77
15
56
20
18
5
55
1.62
2866--2992
20
6.1
20
80
11
105
21
21
4
52
1.64
2934--2994
22
2.8
22
85
5
79
22
22
6
47
1.74
6365--6439
29
2.6
29
89
4
98
44
29
12
14
1.81
8638--8703
22
3.0
22
84
10
73
12
9
3
75
1.14

Tables:   1

The End!