Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009800.1 Corchorus capsularis cultivar CVL-1 contig09821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30907

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8533--8613
39
2.1
39
97
0
153
40
20
2
35
1.66
8716--8751
9
4.1
9
89
7
56
19
0
0
80
0.71
8849--8880
2
15.5
2
93
6
55
50
3
0
46
1.17
13805--13837
17
1.9
17
100
0
66
27
6
36
30
1.81
17459--17513
21
2.7
21
80
8
60
21
20
18
40
1.92
20228--20522
135
2.2
135
88
1
423
20
27
26
26
1.99
23685--24075
168
2.3
168
86
1
536
30
13
16
39
1.88

Tables:   1

The End!