Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009804.1 Corchorus capsularis cultivar CVL-1 contig09825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11589

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
940--984
20
2.2
20
84
4
54
66
8
8
15
1.43
2194--2218
10
2.5
10
100
0
50
28
8
24
40
1.83
2338--2373
19
1.9
18
88
5
54
33
22
2
41
1.68
2627--2726
38
2.6
38
90
0
146
26
24
18
32
1.97
3678--3763
28
3.1
28
96
0
163
18
34
10
36
1.85
11283--11331
15
3.2
14
78
18
53
16
4
2
77
1.01

Tables:   1

The End!