Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009807.1 Corchorus capsularis cultivar CVL-1 contig09828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2607

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1723--1817
16
5.8
17
75
12
101
12
11
37
37
1.80
1741--1827
32
2.7
32
92
0
147
12
10
37
39
1.78
1973--2058
16
5.5
15
74
10
82
4
12
34
47
1.62
1973--2052
32
2.5
32
91
2
126
3
12
35
48
1.59
2492--2530
2
19.5
2
100
0
78
51
0
0
48
1.00
2574--2605
15
2.1
15
100
0
64
46
6
18
28
1.73

Tables:   1

The End!