Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009816.1 Corchorus capsularis cultivar CVL-1 contig09837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8546

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4036--4078
22
2.0
22
95
0
77
46
6
25
20
1.76
4000--4191
58
3.3
58
83
2
226
43
6
20
28
1.77
4092--4139
22
2.2
22
92
0
78
41
6
25
27
1.79
4150--4271
8
16.0
8
64
11
51
45
4
21
28
1.72
4213--4269
25
2.3
24
87
3
78
43
3
22
29
1.70
4422--4472
8
6.6
8
76
17
54
47
5
15
31
1.70
4342--4537
22
8.9
21
70
15
103
44
5
21
28
1.74
4610--4955
58
6.1
58
87
8
471
41
9
21
27
1.83
4766--4799
8
4.2
8
84
0
50
50
0
20
29
1.49
4824--4857
8
4.2
8
84
0
50
50
0
20
29
1.49
4826--4965
48
2.9
48
93
4
228
40
10
20
28
1.85
5819--5843
10
2.5
10
100
0
50
0
8
0
92
0.40
6566--6595
15
2.1
14
93
6
51
33
20
10
36
1.86

Tables:   1

The End!