Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009818.1 Corchorus capsularis cultivar CVL-1 contig09839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12162

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2489--2648
35
4.6
35
88
0
230
31
16
10
41
1.82
5524--5651
36
3.6
36
75
14
106
39
28
17
15
1.90
6873--6908
15
2.4
15
90
0
54
0
27
2
69
1.02
6888--6921
11
3.1
11
88
12
52
0
20
0
79
0.73
6880--6928
15
3.1
16
80
13
57
0
24
2
73
0.94
7725--7792
16
3.9
17
77
12
59
5
19
0
75
1.01
10789--10951
35
4.7
35
94
0
281
31
17
11
39
1.85

Tables:   1

The End!