Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009829.1 Corchorus capsularis cultivar CVL-1 contig09850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39486

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
855--886
2
16.5
2
93
6
57
50
0
0
50
1.00
10594--10621
3
9.3
3
100
0
56
0
32
0
67
0.91
30344--30374
2
15.5
2
100
0
62
51
0
0
48
1.00
31546--31590
9
4.9
9
83
10
56
73
2
24
0
0.95
32257--32297
6
6.5
6
89
10
64
65
0
0
34
0.93
32257--32295
20
2.0
20
100
0
78
69
0
0
30
0.89
32864--32905
2
22.0
2
81
18
54
50
0
2
47
1.14

Tables:   1

The End!