Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009830.1 Corchorus capsularis cultivar CVL-1 contig09851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41717

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7780--7888
54
2.0
54
100
0
218
36
7
20
35
1.80
16999--17067
29
2.3
29
85
7
95
43
14
2
39
1.60
23717--23743
6
4.5
6
100
0
54
14
0
51
33
1.43
32218--32270
25
2.0
28
89
10
85
43
18
13
24
1.86
32228--32279
25
2.1
25
82
7
61
46
19
15
19
1.85
36706--36730
6
4.2
6
100
0
50
16
16
36
32
1.90
36785--36811
7
3.9
7
100
0
54
29
11
29
29
1.91

Tables:   1

The End!