Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009833.1 Corchorus capsularis cultivar CVL-1 contig09854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28385

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
2
15.5
2
100
0
62
48
0
0
51
1.00
612--636
2
12.5
2
100
0
50
52
0
0
48
1.00
1472--1503
2
16.0
2
100
0
64
50
0
0
50
1.00
8312--8355
23
2.0
22
86
8
63
61
22
11
4
1.48
8310--8362
21
2.4
21
82
14
63
60
20
13
5
1.53
8623--8663
2
20.5
2
84
0
55
53
0
46
0
1.00
12685--12760
37
2.1
37
92
0
125
22
14
18
44
1.86
13730--13763
2
17.0
2
93
0
59
47
0
0
52
1.00
20911--20940
15
2.0
15
100
0
60
40
6
13
40
1.71
26991--27028
3
12.7
3
88
0
58
26
39
0
34
1.57
26989--27025
12
3.1
12
100
0
74
24
43
0
32
1.55
28327--28360
1
34.0
1
93
0
59
97
2
0
0
0.19
28360--28385
2
13.0
2
100
0
52
50
50
0
0
1.00

Tables:   1

The End!