Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009834.1 Corchorus capsularis cultivar CVL-1 contig09855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55148

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283--310
1
28.0
1
100
0
56
100
0
0
0
0.00
313--343
2
15.5
2
100
0
62
51
48
0
0
1.00
9124--9156
16
2.1
16
100
0
66
21
18
18
42
1.89
21031--21060
14
2.1
14
100
0
60
56
0
16
26
1.40
21649--21779
69
1.9
69
92
3
219
36
11
35
16
1.85
23810--23916
53
2.0
53
98
0
205
37
9
15
37
1.80
23962--24050
46
1.9
46
97
0
169
23
16
23
35
1.95
53198--53228
16
1.9
16
93
0
53
64
0
35
0
0.94
54660--54734
33
2.3
33
80
0
87
13
40
34
12
1.81
54790--54949
33
4.9
33
88
1
207
12
30
40
16
1.85
55114--55148
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!