Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009835.1 Corchorus capsularis cultivar CVL-1 contig09856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22943

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--152
12
2.1
12
100
0
50
40
32
16
12
1.84
1900--1933
13
2.6
13
85
0
50
35
23
0
41
1.55
1993--2036
10
4.2
11
85
8
56
47
29
0
22
1.51
7986--8141
77
2.0
79
93
2
271
42
19
14
23
1.88
12045--12106
32
1.9
32
93
0
106
40
16
11
32
1.83
12938--12970
2
16.5
2
100
0
66
51
0
0
48
1.00
22576--22614
18
2.2
18
100
0
78
28
10
38
23
1.87

Tables:   1

The End!