Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009837.1 Corchorus capsularis cultivar CVL-1 contig09858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52788

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--381
167
2.3
168
97
1
712
38
9
16
35
1.81
216--3087
322
9.0
319
84
5
3205
32
15
16
35
1.91
216--3087
655
4.5
634
82
7
3218
32
15
16
35
1.91
10209--10247
6
6.5
6
81
0
51
17
51
0
30
1.46
10213--10262
24
2.1
24
88
7
75
18
52
0
30
1.46
10213--10284
12
6.0
12
71
12
58
19
47
2
30
1.64
10234--10302
36
1.9
36
85
5
95
21
43
4
30
1.72
16532--16610
39
2.0
39
92
0
131
37
20
10
31
1.86
18849--19061
106
2.0
112
87
5
321
37
7
6
49
1.55
19629--19660
14
2.4
14
94
5
57
31
37
15
15
1.89
22943--22971
6
4.8
6
100
0
58
82
0
0
17
0.66
33061--33086
5
5.2
5
100
0
52
61
38
0
0
0.96
34647--34673
3
9.0
3
100
0
54
0
33
0
66
0.92

Tables:   1

The End!