Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009840.1 Corchorus capsularis cultivar CVL-1 contig09861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37759

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758--782
12
2.1
12
100
0
50
64
0
0
36
0.94
5193--5218
11
2.4
11
100
0
52
23
23
26
26
2.00
12889--12913
13
1.9
13
100
0
50
40
0
8
52
1.31
24937--24961
3
8.3
3
100
0
50
0
68
0
32
0.90
28464--28510
20
2.3
20
100
0
94
21
8
6
63
1.44
34839--34867
12
2.3
13
94
5
51
17
0
0
82
0.66
35105--35163
2
31.5
2
77
13
63
52
5
0
42
1.23

Tables:   1

The End!