Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009841.1 Corchorus capsularis cultivar CVL-1 contig09862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42810

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5213--5244
7
4.6
7
96
0
55
59
3
12
25
1.48
6582--6653
23
3.1
23
79
0
81
16
12
26
44
1.83
14826--14863
3
12.7
3
100
0
76
65
0
0
34
0.93
16076--16107
2
16.5
2
93
6
57
50
0
0
50
1.00
19190--19227
18
2.1
18
90
0
58
15
47
0
36
1.46
25914--26131
84
2.6
84
94
0
375
31
12
23
32
1.92
30306--30374
21
3.1
21
88
11
111
53
10
36
0
1.35
40057--42238
325
6.7
323
85
3
2758
35
17
14
32
1.91
40067--42244
648
3.4
646
85
3
2880
35
17
14
32
1.91
40067--42238
974
2.2
972
86
4
3032
35
17
14
31
1.91

Tables:   1

The End!