Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009844.1 Corchorus capsularis cultivar CVL-1 contig09865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43341

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3688--3757
36
1.9
36
100
0
140
30
22
20
27
1.98
6113--6265
80
1.9
80
94
4
270
47
15
6
30
1.70
9882--9918
11
2.9
14
76
23
53
21
13
24
40
1.89
10043--10203
81
2.0
80
90
6
254
44
14
7
32
1.74
16519--16543
13
1.9
13
100
0
50
0
8
0
92
0.40
30409--30443
14
2.4
15
85
9
54
77
0
22
0
0.78
31133--31166
4
8.2
4
87
6
50
73
2
0
23
0.97
31133--31166
13
2.8
12
86
8
50
73
2
0
23
0.97
31982--32088
27
4.0
27
95
0
187
42
24
28
4
1.75
40062--40098
2
19.0
2
94
5
67
48
0
0
51
1.00
42863--42899
2
18.0
2
94
5
65
48
2
0
48
1.15
43078--43240
81
2.0
81
98
0
317
31
17
8
42
1.80

Tables:   1

The End!